miRBase entry: api-mir-3038

Stem-loop api-mir-3038


Accession
MI0013988
Description
Acyrthosiphon pisum api-mir-3038 precursor miRNA


Sequence

UGGGGUUUCAAUAGGCAUUUACCcgacauuuaacgagaggcaaugcccuuagaaaucccaug
(((((((((.(..((((((..((((........)).).)..))))))..).)))))))))..

Structure
--         A UA      UA - -  aca 
  UGGGGUUUC A  GGCAUU  C C cg   u
  ||||||||| |  ||||||  | | ||    
  acccuaaag u  ccguaa  g g gc   u
gu         a uc      cg a a  aau 


Annotation confidence Not enough data
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Genome context
GL350549.1: 145537-145598 [+]

Database links

Mature api-miR-3038

Accession MIMAT0014775
Description Acyrthosiphon pisum api-miR-3038 mature miRNA
Sequence 1 - UGGGGUUUCAAUAGGCAUUUACC - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281