miRBase entry: api-mir-3037

Stem-loop api-mir-3037


Accession
MI0013987
Description
Acyrthosiphon pisum api-mir-3037 precursor miRNA


Sequence

aaauucugaauguuauuguagacauucuaugauuuuaaaugUUACAAAACAUUCAGAAUUUUG
((((((((((((((.((((.((((((.((......))))))))))))))))))))))))))..

Structure
--              a    a      c  ug 
  aaauucugaauguu uugu gacauu ua  a
  |||||||||||||| |||| |||||| ||   
  UUUAAGACUUACAA AACA UUguaa au  u
GU              -    -      -  uu 


Annotation confidence Not enough data
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Genome context
GL350343.1: 71782-71844 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from api-mir-3037
Name Accession Chromosome Start End Strand Confidence




Database links

Mature api-miR-3037

Accession MIMAT0014774
Description Acyrthosiphon pisum api-miR-3037 mature miRNA
Sequence 42 - UUACAAAACAUUCAGAAUUUUG - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281