miRBase entry: api-mir-3036-4

Stem-loop api-mir-3036-4


Accession
MI0013985
Description
Acyrthosiphon pisum api-mir-3036-4 precursor miRNA
Gene family
MIPF0001098; mir-3036


Sequence

AUUGGUUUCUAGAUCUCAGCAuuuaaauugauuguugcugggauuuagaaagcaauau
((((.((((((((((((((((..............)))))))))))))))).))))..

Structure
--    G                uuuaaa 
  AUUG UUUCUAGAUCUCAGCA      u
  |||| ||||||||||||||||       
  uaac aaagauuuagggucgu      u
ua    g                uguuag 


Annotation confidence Not enough data
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Genome context
GL349621.1: 185771-185828 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from api-mir-3036-4
Name Accession Chromosome Start End Strand Confidence




Database links

Mature api-miR-3036

Accession MIMAT0014773
Description Acyrthosiphon pisum api-miR-3036 mature miRNA
Sequence 1 - AUUGGUUUCUAGAUCUCAGCA - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281