miRBase entry: api-mir-3028

Stem-loop api-mir-3028


Accession
MI0013971
Description
Acyrthosiphon pisum api-mir-3028 precursor miRNA


Sequence

aaugaauagucugcacuguucaaucucuaccgaauucgugUACGGUUUAGACUAUUCAUUUU
(((((((((((((.(((((.((...((....)).....)).))))).)))))))))))))..

Structure
--             c     u  --auc  u 
  aaugaauagucug acugu ca     uc a
  ||||||||||||| ||||| ||     ||  
  UUACUUAUCAGAU UGGCA gu     ag c
UU             U     U  gcuua  c 


Annotation confidence Not enough data
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Genome context
GL349734.1: 790873-790934 [-]

Database links

Mature api-miR-3028

Accession MIMAT0014764
Description Acyrthosiphon pisum api-miR-3028 mature miRNA
Sequence 41 - UACGGUUUAGACUAUUCAUUUU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281