Stem-loop api-mir-3015b

Accession

MI0013960

Description

Acyrthosiphon pisum api-mir-3015b precursor miRNA

Gene family

MIPF0001111; mir-3015

Sequence

gccguucuuacaauguucaguuuagugucaguuaacuuuaaCCGGACAUUGUGAGAACGGCUC
((((((((((((((((((.(((.(((........)))..))).))))))))))))))))))..

Structure

--                  a   -u   guc 
  gccguucuuacaauguuc guu  agu   a
  |||||||||||||||||| |||  |||    
  CGGCAAGAGUGUUACAGG Caa  uca   g
CU                  C   uu   auu 

Annotation confidence Not enough data

Genome context

GL349654.1: 184591-184653 [+]

Mature api-miR-3015b

• Accession: MIMAT0014753
• Description: Acyrthosiphon pisum api-miR-3015b mature miRNA
• Sequence: 42 - CCGGACAUUGUGAGAACGGCUC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281