miRBase entry: api-mir-14

Stem-loop api-mir-14


Accession
MI0013913
Description
Acyrthosiphon pisum api-mir-14 precursor miRNA
Gene family
MIPF0000182; mir-14

Literature search
1 open access papers mention api-mir-14
(1 sentences)

Sequence

auaaaucggaagggcaugcgucggagagagauaacaggcuuuggcuuuuuauguauuuuauuagUCAGUCUUUUUCUCUCUCCUAUuuacccaccgaa
.....((((..(((..((.((.(((((((((.((.(((((..((((................))))))))))).))))))))).)).))))).)))).

Structure
auaaa    aa   ca  c  c         u  c     uu    uuuuaug 
     ucgg  ggg  ug gu ggagagaga aa aggcu  ggcu       u
     ||||  |||  || || ||||||||| || |||||  ||||        
     agcc  ccc  au UA CCUCUCUCU UU UCUGA  CUga       a
----a    -a   --  u  U         U  -     --    uuauuuu 


Annotation confidence Not enough data
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Genome context
GL349777.1: 408822-408919 [-]

Database links

Mature api-miR-14

Accession MIMAT0014714
Description Acyrthosiphon pisum api-miR-14 mature miRNA
Sequence 65 - UCAGUCUUUUUCUCUCUCCUAU - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281