miRBase entry: api-mir-124

Stem-loop api-mir-124


Accession
MI0013911
Description
Acyrthosiphon pisum api-mir-124 precursor miRNA
Gene family
MIPF0000021; mir-124


Sequence

gcguucacuguugagccuauauguuguuaauaugaaucaUAAGGCACGCGGUGAAUGCCA
(((((((((((.(.((((.((((..............)))))))).))))))))))))..

Structure
--           u a    a    uuguua 
  gcguucacugu g gccu uaug      a
  ||||||||||| | |||| ||||       
  CGUAAGUGGCG C CGGA AUac      u
AC           - A    -    uaagua 


Annotation confidence Not enough data
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Genome context
GL350151.1: 56406-56465 [-]

Database links

Mature api-miR-124

Accession MIMAT0014712
Description Acyrthosiphon pisum api-miR-124 mature miRNA
Sequence 40 - UAAGGCACGCGGUGAAUGCCA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281