Stem-loop tgu-mir-2976-3

Accession

MI0013673

Description

Taeniopygia guttata tgu-mir-2976-3 precursor miRNA

Gene family

MIPF0000893; mir-2976

Literature search

1 open access papers mention tgu-mir-2976-3
(1 sentences)

Sequence

gccggagcggcgggagcggccccgggcccgggcggaggugggaGCGGAGCGGAGCGGAGCGGGGauccaucuccucggucugcggccgcgcuguacugcucccaugcucugauacagccccgccagccgccccccuaugguccugc
((.(((.(((.(((.(((((.(.((((.....(((((((((((((((.((((.(((((.((((((......)))))).)))))..))))......)))))))))).))))).....)))).)...))))))))))...).))).))

Structure

  c   g ---  c   a     --c c    ccggg     -          -----A    -A     G      uc 
gc gga c   gg ggg gcggc   c gggc     cggag gugggaGCGG      GCGG  GCGGA CGGGGa  c
|| ||| |   || ||| |||||   | ||||     ||||| ||||||||||      ||||  ||||| ||||||   
cg ccu g   cc ccc cgccg   g cccg     gucuc uacccucguc      cgcc  cgucu gcuccu  a
  u   g uau  -   -     acc c    acaua     g          augucg    gg     g      cu 

Annotation confidence Not enough data

Genome context

chr4A: 19890709-19890854 [+]

Mature tgu-miR-2976

• Accession: MIMAT0014486
• Description: Taeniopygia guttata tgu-miR-2976 mature miRNA
• Sequence: 44 - GCGGAGCGGAGCGGAGCGGGG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762