miRBase entry: cqu-mir-375-1

Stem-loop cqu-mir-375-1


Accession
MI0013630
Description
Culex quinquefasciatus cqu-mir-375-1 precursor miRNA
Gene family
MIPF0000114; mir-375

Literature search
1 open access papers mention cqu-mir-375-1
(2 sentences)

Sequence

gugccuaacaggagcauccgaguuacucaagccggacguaaccgaaacuuggcucugcuguggaagagUUUGUUCGUUUGGCUCGAGUUAugcgggcuucuuggug
..(((....((((((..(((.((.((((.(((((((((.(((..((((((..(((....).))..)))))))))))))))))).)))).)).))))))))).))).

Structure
gu   uaac      au   a  u    a         u   cg      gg  - u 
  gcc    aggagc  ccg gu acuc agccggacg aac  aaacuu  cu c g
  |||    ||||||  ||| || |||| ||||||||| |||  ||||||  || |  
  ugg    ucuucg  ggc uA UGAG UCGGUUUGC UUG  UUUgag  gg g c
-g   ---u      --   g  U    C         -   --      aa  u u 


Annotation confidence Not enough data
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Genome context
supercont3.4: 25117-25222 [-]

Database links

Mature cqu-miR-375

Accession MIMAT0014443
Description Culex quinquefasciatus cqu-miR-375 mature miRNA
Sequence 69 - UUUGUUCGUUUGGCUCGAGUUA - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119