miRBase entry: cqu-mir-316

Stem-loop cqu-mir-316


Accession
MI0013629
Description
Culex quinquefasciatus cqu-mir-316 precursor miRNA
Gene family
MIPF0000254; mir-316


Sequence

uucaccaaccuggaacgaaccccuuuugauugauuUGUCUUUUUCCGCUUACUGCCGgugguguucgaaagucccgacagcaaacagaaaaaggcgccucaaucaauuacagaacgccgucaaauuagugccccaagaa
..(((.((..(((..((........((((((((..((((((((((.(.((.(((.(((.(((........)))))).))).)).).))))))))))..))))))))........))...)))..)).))).........

Structure
-------uu   c  cc   -aa  aaccccuu        uu          C C  A   C   u   guu 
         cac aa  ugg   cg        uugauuga  UGUCUUUUUC G UU CUG CGg ggu   c
         ||| ||  |||   ||        ||||||||  |||||||||| | || ||| ||| |||    
         gug uu  acu   gc        aacuaacu  gcggaaaaag c aa gac gcc cug   g
aagaacccc   a  aa   gcc  aagacauu        cc          a a  c   a   -   aaa 


Annotation confidence Not enough data
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Genome context
supercont3.496: 152426-152564 [-]

Database links

Mature cqu-miR-316

Accession MIMAT0014442
Description Culex quinquefasciatus cqu-miR-316 mature miRNA
Sequence 36 - UGUCUUUUUCCGCUUACUGCCG - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119