miRBase entry: cqu-mir-87

Stem-loop cqu-mir-87


Accession
MI0013627
Description
Culex quinquefasciatus cqu-mir-87 precursor miRNA
Gene family
MIPF0000152; mir-87


Sequence

aagauugucucuggccagccugaaguuugcuaaaccugguucgucaagGUGAGCAAAUUUUCAGGUGUGUcggagaacaaucac
..(((((((((((((..((((((((((((((..((((.........)))).)))))).))))))))..))))))).))))))..

Structure
aa      -       ca        -      aa    ggu 
  gauugu cucuggc  gccugaag uuugcu  accu   u
  |||||| |||||||  |||||||| ||||||  ||||   c
  cuaaca gaggcUG  UGGACUUU AAACGA  UGga   g
ca      a       UG        U      -G    acu 


Annotation confidence Not enough data
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Genome context
supercont3.431: 379740-379823 [+]

Database links

Mature cqu-miR-87

Accession MIMAT0014439
Description Culex quinquefasciatus cqu-miR-87 mature miRNA
Sequence 49 - GUGAGCAAAUUUUCAGGUGUGU - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119