miRBase entry: cqu-mir-980

Stem-loop cqu-mir-980


Accession
MI0013617
Description
Culex quinquefasciatus cqu-mir-980 precursor miRNA
Gene family
MIPF0000890; mir-980

Literature search
1 open access papers mention cqu-mir-980
(1 sentences)

Sequence

acuacaauucggccuuucauugggacgucuagcucguacuugaaacaguUAGCUGCCUAGUGAAGGGCaauauugu
...(((((...(((((((((((((.((.((((((.((.......)))))))).)))))))))))))))...)))))

Structure
acu     ucg             a  u      c  ac 
   acaau   gccuuucauuggg cg cuagcu gu  u
   |||||   ||||||||||||| || |||||| ||  u
   uguua   CGGGAAGUGAUCC GU GAUuga ca  g
---     uaa             -  C      -  aa 


Annotation confidence Not enough data
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Genome context
supercont3.263: 352873-352948 [+]

Database links

Mature cqu-miR-980

Accession MIMAT0014428
Description Culex quinquefasciatus cqu-miR-980 mature miRNA
Sequence 50 - UAGCUGCCUAGUGAAGGGC - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119