miRBase entry: cqu-mir-1891

Stem-loop cqu-mir-1891


Accession
MI0013611
Description
Culex quinquefasciatus cqu-mir-1891 precursor miRNA
Gene family
MIPF0000857; mir-1891

Literature search
2 open access papers mention cqu-mir-1891
(4 sentences)

Sequence

uuuuucugucauguUGAGGAGUUAAUUUGCGUGUUUuugcauucgauuaaacacguccauuaacucugguacaugaugauaaaagc
(((.((.(((((((...(((((((((..((((((((...(....)...))))))))..)))))))))...))))))))).)))...

Structure
---   u  u       UGA         UU        uug a 
   uuu uc gucaugu   GGAGUUAAU  GCGUGUUU   c u
   ||| || |||||||   |||||||||  ||||||||   |  
   aaa ag uaguaca   ucucaauua  ugcacaaa   g u
cga   u  -       ugg         cc        uua c 


Annotation confidence Not enough data
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Genome context
supercont3.829: 180333-180418 [-]

Database links

Mature cqu-miR-1891

Accession MIMAT0014422
Description Culex quinquefasciatus cqu-miR-1891 mature miRNA
Sequence 15 - UGAGGAGUUAAUUUGCGUGUUU - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119