Stem-loop cqu-mir-1000

Accession

MI0013599

Description

Culex quinquefasciatus cqu-mir-1000 precursor miRNA

Gene family

MIPF0000701; mir-1000

Literature search

1 open access papers mention cqu-mir-1000
(1 sentences)

Sequence

uuuugcuagaaaacgauuAUAUUGUCCUGUCACAGCAGUacuuuuccuuagcuuacuguuguuucgggacauuuacauugauucuagccgucac
....(((((((..((((.....(((((((..(((((((((((.......))..)))))))))..))))))).....)))).)))))))......

Structure

--uuuu       aa    uAUAU       UC         --  uu 
      gcuagaa  cgau     UGUCCUG  ACAGCAGUa  cu  u
      |||||||  ||||     |||||||  |||||||||  ||  c
      cgaucuu  guua     acagggc  uguugucau  ga  c
cacugc       -a    cauuu       uu         uc  uu 

Annotation confidence Not enough data

Genome context

supercont3.153: 102798-102891 [-]

Mature cqu-miR-1000

• Accession: MIMAT0014403
• Description: Culex quinquefasciatus cqu-miR-1000 mature miRNA
• Sequence: 19 - AUAUUGUCCUGUCACAGCAGU - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119