Stem-loop cqu-mir-276-2

Accession

MI0013589

Description

Culex quinquefasciatus cqu-mir-276-2 precursor miRNA

Gene family

MIPF0000124; mir-276

Literature search

1 open access papers mention cqu-mir-276-2
(3 sentences)

Sequence

cgugugguuggugauugccaucAGCGAGGUAUAGAGUUCCUacguugcgaguucgaaaucggUAGGAACUUCAUACCGUGCUCUuggcuagccgaaauucaacaaaa
..((...(((((....((((..((((.(((((.((((((((((....(((........))))))))))))).))))).))))..))))..)))))....))......

Structure

----cg  -ugg     gauu    uc    A     A          guug   guu 
      ug    uuggu    gcca  AGCG GGUAU GAGUUCCUac    cga   c
      ||    |||||    ||||  |||| ||||| ||||||||||    |||    
      ac    agccg    cggu  UCGU CCAUA UUCAAGGAUg    gcu   g
aaaaca  uuaa     --au    UC    G     C          ----   aaa 

Annotation confidence Not enough data

Genome context

supercont3.136: 541130-541236 [+]

Mature cqu-miR-276-5p

• Accession: MIMAT0014392
• Description: Culex quinquefasciatus cqu-miR-276-5p mature miRNA
• Sequence: 23 - AGCGAGGUAUAGAGUUCCU - 41
• Evidence: experimental ; Illumina [1]

Mature cqu-miR-276-3p

• Accession: MIMAT0014393
• Description: Culex quinquefasciatus cqu-miR-276-3p mature miRNA
• Sequence: 63 - UAGGAACUUCAUACCGUGCUCU - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119