Accession
MI0013497
Description
Aedes aegypti
aae-mir-100 precursor miRNA
Gene family
MIPF0000033;
mir-10
Literature search
3 open access papers mention aae-mir-100
(4 sentences)
(4 sentences)
Sequence
52620
reads,
2715
reads per million, 2 experiments
gcguagugguuguaguuacccauuugcaggAACCCGUAGAUCCGAACUUGUGcugccguuucacauguuacaagaacggauguaugggauucugccgauguauggcuaaagcaucgaucgauuugu
(((...((((((((((((..((((.((((((.((((((.(((((..(((((((((........)).).))))))..))))).)))))).)))))).))))..))))))......))))))...)))
(((...((((((((((((..((((.((((((.((((((.(((((..(((((((((........)).).))))))..))))).)))))).)))))).))))..))))))......))))))...)))
Structure
uag ------ cc u A G AA - - ccg gcg ugguug uaguua cauu gcaggA CCCGUA AUCCG CUUGUG c ug u ||| |||||| |||||| |||| |||||| |||||| ||||| |||||| | || ugu gcuagc aucggu guag cgucuu ggguau uaggc gaacau g ac u uua uacgaa au c a g aa u u acu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This miRNA was identified independently in Aedes aegypti [1] and in the closely related Aedes albopictus, for which there was no genome sequence [2]. The latter reads were therefore also mapped to the Aedes aegypti genome [2].
Genome context
supercont1.43: 1142154-1142279 [+]
Database links
Mature aae-miR-100
| Accession | MIMAT0014291 |
| Description | Aedes aegypti aae-miR-100 mature miRNA |
| Sequence | 31 - AACCCGUAGAUCCGAACUUGUG - 52 |
| Evidence |
experimental
454 [1], Illumina [2] |
References
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