Stem-loop rco-MIR171f

Accession

MI0013403

Description

Ricinus communis rco-MIR171f precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

3 open access papers mention rco-MIR171f
(8 sentences)

Sequence

ugugauauuggccugguucacucagacaugaaaccuaucccuucuccugcuuauugccugaauaggguguuguugcuauauguuuUGAUUGAGCCGUGCCAAUAUCucagu
((.(((((((((.(((((((.(((((((((.(((....((((..((..((.....))..))..))))....)))....)))).))))).))))))).))))))))).))..

Structure

--  u         c       c     -    ---a   cuau    uc  cu  u 
  ug gauauuggc ugguuca ucaga caug    aac    cccu  uc  gc u
  || ||||||||| ||||||| ||||| ||||    |||    ||||  ||  || a
  ac CUAUAACCG GCCGAGU AGUuu guau    uug    ggga  ag  cg u
ug  u         U       U     u    aucg   uugu    ua  uc  u 

Annotation confidence Not enough data

Genome context

EQ974221.1: 175562-175672 [+]

Mature rco-miR171f

• Accession: MIMAT0014177
• Description: Ricinus communis rco-miR171f mature miRNA
• Sequence: 86 - UGAUUGAGCCGUGCCAAUAUC - 106
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995