Stem-loop rco-MIR171d

Accession

MI0013401

Description

Ricinus communis rco-MIR171d precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

3 open access papers mention rco-MIR171d
(8 sentences)

Sequence

ugugauguuggcccgguucacucagacaaaaacgauguguuuucucaagcauuuguuuuucgaaacgcuugauauguuaacacaagcauaauggccuuUGAUUGAGCCGUGCCAAUAUCuuagu
...(((((((((.(((((((.(((((.........((((((..(((((((.(((........))).))))))...)..)))))).((......)).))))).))))))).))))))))).....

Structure

--ugu         c       c     ---caaaaacga      uu ---      a   guu 
     gauguuggc cgguuca ucaga            uguguu  c   ucaagc uuu   u
     ||||||||| ||||||| |||||            ||||||  |   |||||| |||    
     CUAUAACCG GCCGAGU AGUuu            acacaa  g   aguucg aaa   u
ugauu         U       U     ccgguaauacga      uu uau      c   gcu 

Annotation confidence Not enough data

Genome context

EQ973772.1: 3804732-3804855 [-]

Mature rco-miR171d

• Accession: MIMAT0014175
• Description: Ricinus communis rco-miR171d mature miRNA
• Sequence: 99 - UGAUUGAGCCGUGCCAAUAUC - 119
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995