Stem-loop rco-MIR171c

Accession

MI0013400

Description

Ricinus communis rco-MIR171c precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

3 open access papers mention rco-MIR171c
(8 sentences)

Sequence

ucugauguuggcaugguucaaucaaaucgaagcacucagcugccugcugaguucuuuaaucUGAUUGAGCCGUGCCAAUAUCgccau
..((((((((((((((((((((((.((.((((.(((((((.....))))))).)))).)).))))))))))))))))))))))....

Structure

--uc                      a  c    c       u 
    ugauguuggcaugguucaauca au gaag acucagc g
    |||||||||||||||||||||| || |||| ||||||| c
    gCUAUAACCGUGCCGAGUUAGU ua uuuc ugagucg c
uacc                      c  a    u       u 

Annotation confidence Not enough data

Genome context

EQ973774.1: 627331-627417 [-]

Mature rco-miR171c

• Accession: MIMAT0014174
• Description: Ricinus communis rco-miR171c mature miRNA
• Sequence: 62 - UGAUUGAGCCGUGCCAAUAUC - 82
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995