Stem-loop sequence ath-MIR2936

Accession

MI0013366 (change log)

Description

Arabidopsis thaliana miR2936 stem-loop

Literature search

1 open access papers mention ath-MIR2936
(2 sentences)

Stem-loop

              --------agc       -       c      gauaccaa   ---u    aauc            -----uauaau     cau 
5' ccauuuucgaa           cuugaga gagagaa acagac        cuu    cuuc    ucguugccgcag           uaucu   u
   |||||||||||           ||||||| ||||||| ||||||        |||    ||||    ||||||||||||           |||||    
3' gguaaaagcuu           gaacuuu cucucuu ugucug        gaa    gaag    agcggcggcguc           auagg   c
              cauucaccaaa       u       u      aaaaauaa   cauc    -aac            uuccucucuau     cuc 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (TAIR10; GCA_000001735.1): chr4: 1046804-1046983 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0013366

Mature sequence ath-miR2936

• Accession: MIMAT0014140
• Sequence: 15 - cuugagagagagaacacagacg - 36
• Evidence: experimental; 454 [1]

References

1. PMID:20042113 "MicroRNA and tasiRNA diversity in mature pollen of Arabidopsis thaliana" Grant-Downton R, Le Trionnaire G, Schmid R, Rodriguez-Enriquez J, Hafidh S, Mehdi S, Twell D, Dickinson H BMC Genomics. 10:643(2009).