Stem-loop ath-MIR2933a

Accession

MI0013362

Description

Arabidopsis thaliana ath-MIR2933a precursor miRNA

Gene family

MIPF0001072; MIR2933

Literature search

1 open access papers mention ath-MIR2933a
(1 sentences)

Sequence

gaaauucguuggcgauuuugagugaaaucggagagggaauucgucggcgauuuugaguGAAAUCGGAGAGGAAAUUCGCCggcgauuuugagugaaaucggagaggaaaauc
....(((.((..((((((((...(((((((..(.(.((((((.((..(((((((....)))))))..)).).))))).))..)))))))...))))))))..)).)))....

Structure

gaaa   g  gg        agu       ga a g     - g  gg       g 
    uuc uu  cgauuuug   gaaaucg  g g gaauu c uc  cgauuuu a
    ||| ||  ||||||||   |||||||  | | ||||| | ||  |||||||  
    aag ag  gcuaaagu   uuuuagc  C C CUUAA G AG  GCUAAAG g
cuaa   g  ag        gag       gg - G     A G  AG       u 

Annotation confidence Not enough data

Genome context

chr1: 11901409-11901520 [+]

Mature ath-miR2933a

• Accession: MIMAT0014136
• Description: Arabidopsis thaliana ath-miR2933a mature miRNA
• Sequence: 59 - GAAAUCGGAGAGGAAAUUCGCC - 80
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20042113
   MicroRNA and tasiRNA diversity in mature pollen of Arabidopsis thaliana
   Grant-Downton R, Le Trionnaire G, Schmid R, Rodriguez-Enriquez J, Hafidh S, Mehdi S, Twell D, Dickinson H
   BMC Genomics (2009) 10:643