Stem-loop ccl-MIR167a

Accession

MI0013298

Description

Citrus clementina ccl-MIR167a precursor miRNA

Gene family

MIPF0000023; MIR167_1

Sequence

cauauucgugcacuaguaguaguUGAAGCUGCCAGCAUGAUCUGAacuuuccuugaccuccaucucuagggaaaggccagaucaucuggcaguuucaccuauugaugguagcauggccaga
.....((((((((((.((((((.((((((((((((.((((((((..((((((((((........)).))))))))..)))))))))))))))))))).)))))).)))).)))))).....

Structure

cauau      -    g      u            C        Aa        -  ccu 
     ucgugc acua uaguag UGAAGCUGCCAG AUGAUCUG  cuuuccuu ga   c
     |||||| |||| |||||| |||||||||||| ||||||||  |||||||| ||    
     gguacg uggu guuauc acuuugacgguc uacuagac  gaaaggga cu   c
agacc      a    a      c            -        cg        u  cua 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccl-miR167a

• Accession: MIMAT0014072
• Description: Citrus clementina ccl-miR167a mature miRNA
• Sequence: 24 - UGAAGCUGCCAGCAUGAUCUGA - 45
• Evidence: experimental ; Northern [1], RACE [1]

References

1. PubMed ID: 19585144
   Identification and characterization of 27 conserved microRNAs in citrus
   "Song C, Fang J, Li X, Liu H, Thomas Chao C"
   "Planta (2009) 230:671-685