miRBase entry: zma-MIR1432

Stem-loop zma-MIR1432


Accession
MI0013243
Description
Zea mays zma-MIR1432 precursor miRNA
Gene family
MIPF0001063; MIR1432

Literature search
8 open access papers mention zma-MIR1432
(17 sentences)

Sequence

250 reads, 1912 reads per million, 111 experiments
gCUCAGGAGAGAUGACACCGACgccagacggaccgguccauccgcgccgugucuguccgucugaaguGGGUGUCAUCUCGCCUGAAGCA
(((((((.(((((((((((.((..(((((((((((((.(....).)))).....)))))))))..)).))))))))))).)))).))).

Structure
-   -    A           G  gc         -----    c a 
 gCU CAGG GAGAUGACACC AC  cagacggac     cggu c u
 ||| |||| ||||||||||| ||  |||||||||     |||| |  
 CGA GUCC CUCUACUGUGG ug  gucugccug     gccg g c
A   A    G           G  aa         ucugu    c c 


Annotation confidence Not enough data
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Genome context
chr7: 165932790-165932878 [-]

Database links

Mature zma-miR1432-5p

Accession MIMAT0014032
Description Zea mays zma-miR1432-5p mature miRNA
Sequence 2 - CUCAGGAGAGAUGACACCGAC - 22
Evidence experimental
Illumina [1]
Database links

Mature zma-miR1432-3p

Accession MIMAT0015366
Description Zea mays zma-miR1432-3p mature miRNA
Sequence 68 - GGGUGUCAUCUCGCCUGAAGCA - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19936050
    A genome-wide characterization of microRNA genes in maize
    Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
    PLoS Genet (2009) 5:e1000716