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miRBase |
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Stem-loop sequence ssc-mir-505 |
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Accession | MI0013171 (change log) | ||||
Description | Sus scrofa miR-505 stem-loop | ||||
Gene family | MIPF0000217; mir-505 | ||||
Literature search |
3 open access papers mention ssc-mir-505 | ||||
Stem-loop |
-- a u u g a -u g 5' gc c cag gggggagccag aagu uugauguu cu c || | ||| ||||||||||| |||| |||||||| || 3' cg g guc cuccuuugguc uuca aacugcga gg c ua a - u g c uu a |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
Mature sequence ssc-miR-505 |
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Accession | MIMAT0013961 |
Sequence |
50 - ucaacacuugcugguuuccucu - 71 |
Deep sequencing | 547 reads, 14 experiments |
Evidence | experimental; Illumina [1-3] |
References |
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1 |
PMID:19917043
"MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing"
Anim Genet. 41:159-168(2010).
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2 |
PMID:21312241
"MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing"
J Cell Biochem. 112:1318-1328(2011).
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3 |
PMID:24499489
"Exploration of microRNAs in porcine milk exosomes"
BMC Genomics. 15:100(2014).
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