Stem-loop sequence ssc-mir-202

AccessionMI0013157 (change log)
DescriptionSus scrofa miR-202 stem-loop
Gene family MIPF0000121; mir-202
Literature search

7 open access papers mention ssc-mir-202
(10 sentences)

   -  c       cc         a           g   gu 
5'  cg cguuccg  uuccuaugc uauacuucuuu agg  c
    || |||||||  ||||||||| ||||||||||| |||   
3'  gc gcggggc  aaggguacg auguggagaag ucc  u
   a  a       ca         g           -   gg 
Get sequence
Deep sequencing
82021 reads, 1.61e+04 reads per million, 15 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Sscrofa10.2; GCA_000003025.4) Overlapping transcripts
chr14: 153169585-153169664 [-]
Database links

Mature sequence ssc-miR-202-5p

Accession MIMAT0013948
Previous IDsssc-miR-202

13 - 


 - 33

Get sequence
Deep sequencing81212 reads, 15 experiments
Evidence experimental; Illumina [1-2]

Mature sequence ssc-miR-202-3p

Accession MIMAT0022956

49 - 


 - 67

Get sequence
Deep sequencing737 reads, 15 experiments
Evidence experimental; Illumina [2]


PMID:19917043 "MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing" Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, Bendixen C, Thomsen B Anim Genet. 41:159-168(2010).
PMID:21312241 "MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing" Li G, Li Y, Li X, Ning X, Li M, Yang G J Cell Biochem. 112:1318-1328(2011).