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miRBase |
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Stem-loop sequence ssc-mir-450b |
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Accession | MI0013140 (change log) | |||||||||
Description | Sus scrofa miR-450b stem-loop | |||||||||
Gene family | MIPF0000128; mir-450 | |||||||||
Literature search |
5 open access papers mention ssc-mir-450b | |||||||||
Stem-loop |
-------- uuu u ug - gua 5' aaaauuau ugcaa auguucc a auau a |||||||| ||||| ||||||| | |||| u 3' uuuugaua acguu uacaagg u uaug a uagcuaug ccu u gu a aau |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence ssc-miR-450b-5p |
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Accession | MIMAT0013927 |
Previous IDs | ssc-miR-450b |
Sequence |
9 - uuuugcaauauguuccugaaua - 30 |
Deep sequencing | 8795 reads, 15 experiments |
Evidence | experimental; Illumina [1-3] |
Mature sequence ssc-miR-450b-3p |
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Accession | MIMAT0017380 |
Sequence |
46 - uugggaacauuuugcauccau - 66 |
Deep sequencing | 58 reads, 10 experiments |
Evidence | experimental; Illumina [2-3] |
References |
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1 |
PMID:19917043
"MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing"
Anim Genet. 41:159-168(2010).
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2 |
PMID:20433717
"Deciphering the porcine intestinal microRNA transcriptome"
BMC Genomics. 11:275(2010).
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3 |
PMID:21312241
"MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing"
J Cell Biochem. 112:1318-1328(2011).
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