Stem-loop sequence bmo-mir-2856-2

Accession

MI0012999 (change log)

Description

Bombyx mori miR-2856-2 stem-loop

Gene family

MIPF0001071; mir-2856

Literature search

1 open access papers mention bmo-mir-2856-2
(1 sentences)

Stem-loop

   cugugcuauc      -gu     ga     ag  ug  acag 
5'           uugucu   gguuc  gggug  au  uc    c
             ||||||   |||||  |||||  ||  ||    a
3'           aacaga   ccaag  cuuac  ug  gg    c
   aaauauaauu      aug     ag     -a  gu  auau 

Deep sequencing

65 reads, 0 reads per million, 3 experiments

Confidence

Annotation confidence: not enough data

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Genome context

Coordinates (ASM15162v1; GCA_000151625.1)	Overlapping transcripts
NW_004582014.1: 1881153-1881239 [-]	intergenic
NW_004583789.1: 29-115 [+]	intergenic

Database links

• miRBase Tracker:MI0012999

Mature sequence bmo-miR-2856-5p

• Accession: MIMAT0013792
• Previous IDs: bmo-miR-2856*
• Sequence: 11 - uugucugugguucgagggug - 30
• Deep sequencing: 6 reads, 2 experiments
• Evidence: experimental; Illumina [1]

Mature sequence bmo-miR-2856-3p

• Accession: MIMAT0013793
• Previous IDs: bmo-miR-2856
• Sequence: 56 - acauucgagaaccguaagacaa - 77
• Deep sequencing: 106 reads, 3 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00003F3FC7_7091

References

1. PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).