miRBase entry: eca-mir-384

Stem-loop eca-mir-384


Accession
MI0012961
Description
Equus caballus eca-mir-384 precursor miRNA
Gene family
MIPF0000289; mir-384


Sequence

34 reads, 5 reads per million, 1 experiments
uguuaaaucaggaguuguaaacaauuccuaggcaauguguauaauguuuguaagucAUUCCUAGAAAUUGUUCACAaugccuguaaca
(((((...((((.(((((.(((((((.(((((.((((..(((((...)))))...))))))))).))))))).))))).)))))))))

Structure
     aau    a     a       c     c    -ug     u 
uguua   cagg guugu aacaauu cuagg aaug   uauaa  
|||||   |||| ||||| ||||||| ||||| ||||   ||||| g
acaau   gucc uaACA UUGUUAA GAUCC UUAc   auguu  
     ---    g     C       A     -    uga     u 


Annotation confidence Not enough data
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Genome context
chrX: 57166981-57167068 [-]

Database links

Mature eca-miR-384

Accession MIMAT0013215
Description Equus caballus eca-miR-384 mature miRNA
Sequence 57 - AUUCCUAGAAAUUGUUCACA - 76
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131