miRBase entry: eca-mir-361

Stem-loop eca-mir-361


Accession
MI0012956
Description
Equus caballus eca-mir-361 precursor miRNA
Gene family
MIPF0000172; mir-361

Literature search
2 open access papers mention eca-mir-361
(4 sentences)

Sequence

872 reads, 132 reads per million, 1 experiments
ggagcUUAUCAGAAUCUCCAGGGGUACugauaauuuuaaaaagUCCCCCAGGCGUGAUUCUGAUUUgcuuc
(((((..(((((((((.((.((((.(((.............))).)))).))...)))))))))..)))))

Structure
     UU         --U  A    U   gauaa 
ggagc  AUCAGAAUC   CC GGGG ACu     u
|||||  |||||||||   || |||| |||     u
cuucg  UAGUCUUAG   GG CCCC Uga     u
     UU         UGC  A    C   aaaau 


Annotation confidence High
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Genome context
chrX: 65084146-65084216 [-]

Database links

Mature eca-miR-361-5p

Accession MIMAT0013208
Description Equus caballus eca-miR-361-5p mature miRNA
Sequence 6 - UUAUCAGAAUCUCCAGGGGUAC - 27
Evidence not_experimental

Mature eca-miR-361-3p

Accession MIMAT0013209
Description Equus caballus eca-miR-361-3p mature miRNA
Sequence 44 - UCCCCCAGGCGUGAUUCUGAUUU - 66
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131