miRBase entry: eca-mir-224

Stem-loop eca-mir-224


Accession
MI0012954
Description
Equus caballus eca-mir-224 precursor miRNA
Gene family
MIPF0000088; mir-224

Literature search
1 open access papers mention eca-mir-224
(4 sentences)

Sequence

gggcuuuCAAGUCACUAGUGGUUCCGUUuaguagaugguugugcauuguuucaaaauggugcccuagugacuacaaagccc
(((((((..(((((((((.(((.((((((.(..((((......))))....).)))))).))))))))))))..)))))))

Structure
       CA         U   U      a --ua    gu 
gggcuuu  AGUCACUAG GGU CCGUUu g    gaug  u
|||||||  ||||||||| ||| |||||| |    ||||   
cccgaaa  ucagugauc ccg gguaaa c    uuac  g
       ca         -   u      a uuug    gu 


Annotation confidence Not enough data
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Genome context
chrX: 120688687-120688767 [-]

Database links

Mature eca-miR-224

Accession MIMAT0013206
Description Equus caballus eca-miR-224 mature miRNA
Sequence 8 - CAAGUCACUAGUGGUUCCGUU - 28
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131