miRBase entry: eca-mir-383

Stem-loop eca-mir-383


Accession
MI0012930
Description
Equus caballus eca-mir-383 precursor miRNA
Gene family
MIPF0000137; mir-383


Sequence

247 reads, 37 reads per million, 1 experiments
cuccucAGAUCAGAAGGUGAUUGUGGCUuuggguggauauuaaucagccacagcacugccuggucagaaagag
(((.((.((((((..((((.((((((((...(((........)))))))))))))))..)))))).))..)))

Structure
   -c  A      AA    A        uug   gga 
cuc  uc GAUCAG  GGUG UUGUGGCU   ggu   u
|||  || ||||||  |||| ||||||||   |||    
gag  ag cugguc  ucac gacaccga   cua   a
   aa  a      cg    -        ---   auu 


Annotation confidence Not enough data
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Genome context
chr27: 18266585-18266657 [-]

Database links

Mature eca-miR-383

Accession MIMAT0013185
Description Equus caballus eca-miR-383 mature miRNA
Sequence 7 - AGAUCAGAAGGUGAUUGUGGCU - 28
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131