miRBase entry: eca-mir-32

Stem-loop eca-mir-32


Accession
MI0012924
Description
Equus caballus eca-mir-32 precursor miRNA
Gene family
MIPF0000069; mir-32

Literature search
1 open access papers mention eca-mir-32
(1 sentences)

Sequence

40 reads, 6 reads per million, 1 experiments
ggagaUAUUGCACAUUACUAAGUUGCAcguugucacggccucagugcaauuuagugugugugauauuuuc
(((((((((((((((.(((((((((((((..((....))..).)))))))))))))))))))))))))))

Structure
               U            - uu  c 
ggagaUAUUGCACAU ACUAAGUUGCAc g  gu a
||||||||||||||| |||||||||||| |  ||  
cuuuuauagugugug ugauuuaacgug c  cg c
               -            a uc  g 


Annotation confidence Not enough data
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Genome context
chr25: 14424855-14424924 [-]

Database links

Mature eca-miR-32

Accession MIMAT0013180
Description Equus caballus eca-miR-32 mature miRNA
Sequence 6 - UAUUGCACAUUACUAAGUUGCA - 27
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131