miRBase entry: eca-mir-219-2

Stem-loop eca-mir-219-2


Accession
MI0012923
Description
Equus caballus eca-mir-219-2 precursor miRNA
Gene family
MIPF0000044; mir-219


Sequence

1 reads, 0 reads per million, 1 experiments
acucaggggcuucgccacUGAUUGUCCAAACGCAAUUCUuguacgagucugcggccaaccgagaauuguggcuggacaucuguggcugagcuccggg
.(((.(((((((.(((((.(((.(((((..(((((((((((...(.(((...))))...)))))))))))..)))))))).))))).))))))))))

Structure
a   a       c     U   U     AA           uac a   u 
 cuc ggggcuu gccac GAU GUCCA  CGCAAUUCUug   g guc  
 ||| ||||||| ||||| ||| |||||  |||||||||||   | ||| g
 ggg ccucgag cggug cua caggu  guguuaagagc   c cgg  
-   -       u     u   -     cg           caa -   c 


Annotation confidence Not enough data
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Genome context
chr25: 31667362-31667458 [-]

Database links

Mature eca-miR-219-5p

Accession MIMAT0013099
Description Equus caballus eca-miR-219-5p mature miRNA
Sequence 19 - UGAUUGUCCAAACGCAAUUCU - 39
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131