miRBase entry: eca-mir-370

Stem-loop eca-mir-370


Accession
MI0012887
Description
Equus caballus eca-mir-370 precursor miRNA
Gene family
MIPF0000167; mir-370


Sequence

110 reads, 17 reads per million, 1 experiments
agacagagaggccaggucacgucucugcaguuacacagcucaugaguGCCUGCUGGGGUGGAACCUGGUcugucu
....(((.(((((((((..((((((.((((.(((.((.....)).))).)))).))))))..))))))))).)))

Structure
agac   g         ca      u    u   a  g 
    aga aggccaggu  cgucuc gcag uac ca c
    ||| |||||||||  |||||| |||| ||| || u
    ucu ucUGGUCCA  GUGGGG CGUC Gug gu c
----   g         AG      U    C   a  a 


Annotation confidence Not enough data
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Genome context
chr24: 42773742-42773816 [+]

Database links

Mature eca-miR-370

Accession MIMAT0013142
Description Equus caballus eca-miR-370 mature miRNA
Sequence 48 - GCCUGCUGGGGUGGAACCUGGU - 69
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131