miRBase entry: eca-mir-876

Stem-loop eca-mir-876


Accession
MI0012872
Description
Equus caballus eca-mir-876 precursor miRNA
Gene family
MIPF0000430; mir-876


Sequence

2 reads, 0 reads per million, 1 experiments
ugaagugcugUGGAUUUCUUUGUGAAUCACCAuaucugagcuaaugUGGUGGUGGUUUACAAAGUAAUUCAuagugcuuca
((((((((((((((((.((((((((((((((((..(.........)..)))))))))))))))).))))))))))))))))

Structure
                U                au uga 
ugaagugcugUGGAUU CUUUGUGAAUCACCAu  c   g
|||||||||||||||| ||||||||||||||||  |   c
acuucgugauACUUAA GAAACAUUUGGUGGUG  g   u
                U                GU uaa 


Annotation confidence Not enough data
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Genome context
chr23: 46400206-46400286 [-]

Database links

Mature eca-miR-876-5p

Accession MIMAT0013121
Description Equus caballus eca-miR-876-5p mature miRNA
Sequence 11 - UGGAUUUCUUUGUGAAUCACCA - 32
Evidence not_experimental

Mature eca-miR-876-3p

Accession MIMAT0013122
Description Equus caballus eca-miR-876-3p mature miRNA
Sequence 47 - UGGUGGUGGUUUACAAAGUAAUUCA - 71
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131