Stem-loop eca-mir-24-2

Accession

MI0012864

Description

Equus caballus eca-mir-24-2 precursor miRNA

Gene family

MIPF0000041; mir-24

Literature search

3 open access papers mention eca-mir-24-2
(4 sentences)

Sequence

1935 reads, 293 reads per million, 1 experiments

cuccggugccuacugagcugauaucaguucucauuuuacacacUGGCUCAGUUCAGCAGGAACAGgag
((((.((.(((.(((((((((..(((((.............))))).))))))))).))).)).))))

Structure

    g  g   a         ua     ucuca 
cucc gu ccu cugagcuga  ucagu     u
|||| || ||| |||||||||  |||||     u
gagG CA GGA GACUUGACU  GGUca     u
    A  A   C         -C     cacau 

Annotation confidence Not enough data

Genome context

chr23: 2317177-2317244 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from eca-mir-24-2

Mature eca-miR-24

• Accession: MIMAT0012987
• Description: Equus caballus eca-miR-24 mature miRNA
• Sequence: 44 - UGGCUCAGUUCAGCAGGAACAG - 65
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131