Stem-loop sequence eca-mir-206-2

Accession

MI0012845 (change log)

Description

Equus caballus miR-206-2 stem-loop

Gene family

MIPF0000038; mir-1

Literature search

3 open access papers mention eca-mir-206-2
(12 sentences)

Stem-loop

   -                     cc     -    u 
5'  aggccacaugcuucuuuauau  ccaua cgga u
    |||||||||||||||||||||  ||||| ||||  
3'  uuuggugugugaaggaaugua  gguau guuu a
   c                     -a     c    c 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (EquCab2.0; GCF_000002305.2): chr20: 49820595-49820663 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from eca-mir-206-2

• eca-mir-206-2: chr20: 49820595-49820663 [+]
• eca-mir-133b: chr20: 49824706-49824766 [+]

Database links

• EntrezGene:MIR206-2
• miRBase Tracker:MI0012845

Mature sequence eca-miR-206

• Accession: MIMAT0013098
• Sequence: 44 - uggaauguaaggaagugugugg - 65
• Evidence: not experimental

References

1. PMID:19406225 "In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach" Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y Genomics. 94:125-131(2009).