miRBase entry: eca-mir-568

Stem-loop eca-mir-568


Accession
MI0012842
Description
Equus caballus eca-mir-568 precursor miRNA
Gene family
MIPF0000408; mir-568

Literature search
1 open access papers mention eca-mir-568
(1 sentences)

Sequence

AUGUAUAAAUGUAUACACACuuccuauauauauccauauauauaguguauauauuauacau
((((((((.(((((((((......((((((((....)))))))))))))))))))))))))

Structure
        A         ACuucc        u 
AUGUAUAA UGUAUACAC      uauauaua c
|||||||| |||||||||      ||||||||  
uacauauu auauaugug      auauauau c
        -         ------        a 


Annotation confidence Not enough data
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Genome context
chr19: 43734251-43734311 [+]

Database links

Mature eca-miR-568

Accession MIMAT0013095
Description Equus caballus eca-miR-568 mature miRNA
Sequence 1 - AUGUAUAAAUGUAUACACAC - 20
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131