miRBase entry: eca-mir-1461

Stem-loop eca-mir-1461


Accession
MI0012816
Description
Equus caballus eca-mir-1461 precursor miRNA


Sequence

AUCUCUACGGGUAAGUGUGUGAuuucuuuagugacaucacauuugccugcagagau
((((((.(((((((..(((((((.((......)).)))))))))))))).))))))

Structure
      A       GU       u  uu 
AUCUCU CGGGUAA  GUGUGAu uc  u
|||||| |||||||  ||||||| ||   
uagaga guccguu  uacacua ag  a
      c       --       c  ug 


Annotation confidence Not enough data
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Genome context
chr15: 44358830-44358885 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from eca-mir-1461
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-1461

Accession MIMAT0013071
Description Equus caballus eca-miR-1461 mature miRNA
Sequence 1 - AUCUCUACGGGUAAGUGUGUGA - 22
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131