Stem-loop sequence eca-mir-93

AccessionMI0012804 (change log)
DescriptionEquus caballus miR-93 stem-loop
Gene family MIPF0000001; mir-17
Literature search

1 open access papers mention eca-mir-93
(1 sentences)

   ca       -     u    g   u  g u 
5'   aagugcu guucg gcag uag gu a u
     ||||||| ||||| |||| ||| || | a
3'   uucacga cgagu cguc auc ca u c
   cc       u     -    -   -  g c 
Get sequence
Deep sequencing
2994 reads, 150 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (EquCab2.0; GCF_000002305.2) Overlapping transcripts
chr13: 8034465-8034523 [-]
ENSECAT00000028501 ; eca-mir-93-201; exon 1
ENSECAT00000015853 ; MCM7-201; intron 13
Clustered miRNAs
< 10kb from eca-mir-93
eca-mir-106bchr13: 8034691-8034749 [-]
eca-mir-93chr13: 8034465-8034523 [-]
eca-mir-25chr13: 8034246-8034329 [-]
Database links

Mature sequence eca-miR-93

Accession MIMAT0013060

1 - 


 - 23

Get sequence
Deep sequencing2993 reads, 1 experiments
Evidence not experimental


PMID:19406225 "In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach" Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y Genomics. 94:125-131(2009).