miRBase entry: eca-mir-769a

Stem-loop eca-mir-769a


Accession
MI0012765
Description
Equus caballus eca-mir-769a precursor miRNA
Gene family
MIPF0000727; mir-769


Sequence

gcccucugcccGGAGACCUCUGGGUUCUGAGCUgugacguggcuucggagCUGGGAUCUCGGGGGUCUUGGUUcagggu
(((((..(((..((((((((((((.(((.((((.(((.......))).)))).))).)))))))))))))))..)))))

Structure
     cu   cG            U   G    g   cg 
gcccu  gcc  GAGACCUCUGGG UCU AGCU uga  u
|||||  |||  |||||||||||| ||| |||| |||  g
uggga  UGG  UUCUGGGGGCUC AGG UCga gcu  g
     cU   --            U   G    g   uc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr10: 16583595-16583673 [-]

Database links

Mature eca-miR-769a-5p

Accession MIMAT0013015
Description Equus caballus eca-miR-769a-5p mature miRNA
Sequence 12 - GGAGACCUCUGGGUUCUGAGCU - 33
Evidence not_experimental

Mature eca-miR-769a-3p

Accession MIMAT0013016
Description Equus caballus eca-miR-769a-3p mature miRNA
Sequence 51 - CUGGGAUCUCGGGGGUCUUGGUU - 73
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131