miRBase entry: eca-mir-122

Stem-loop eca-mir-122


Accession
MI0012747
Description
Equus caballus eca-mir-122 precursor miRNA
Gene family
MIPF0000095; mir-122

Literature search
8 open access papers mention eca-mir-122
(123 sentences)

Sequence

11 reads, 2 reads per million, 1 experiments
agcugUGGAGUGUGACAAUGGUGUUUGuguccaaacuaucaaacgccauuaucacacuaaauagcu
((((((..(((((((.(((((((((((............))))))))))).)))))))..))))))

Structure
      GG       C           ugucc 
agcugU  AGUGUGA AAUGGUGUUUG     a
||||||  ||||||| |||||||||||      
ucgaua  ucacacu uuaccgcaaac     a
      aa       a           uauca 


Annotation confidence Not enough data
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Genome context
chr8: 75662539-75662604 [+]

Database links

Mature eca-miR-122

Accession MIMAT0012995
Description Equus caballus eca-miR-122 mature miRNA
Sequence 6 - UGGAGUGUGACAAUGGUGUUUG - 27
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131