miRBase entry: eca-mir-218-1

Stem-loop eca-mir-218-1


Accession
MI0012683
Description
Equus caballus eca-mir-218-1 precursor miRNA
Gene family
MIPF0000026; mir-218


Sequence

59 reads, 9 reads per million, 1 experiments
UUGUGCUUGAUCUAACCAUGUgguugccagguaugaguaaaacaugguuccgucaagcacca
..(((((((((..((((((((..((((((....)).)))).))))))))..)))))))))..

Structure
UU         CU        gg    -  g 
  GUGCUUGAU  AACCAUGU  uugc ca g
  |||||||||  ||||||||  |||| ||  
  cacgaacug  uugguaca  aaug gu u
ac         cc        -a    a  a 


Annotation confidence Not enough data
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Genome context
chr3: 103550490-103550551 [-]

Database links

Mature eca-miR-218

Accession MIMAT0012928
Description Equus caballus eca-miR-218 mature miRNA
Sequence 1 - UUGUGCUUGAUCUAACCAUGU - 21
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131