miRBase entry: eca-mir-1892

Stem-loop eca-mir-1892


Accession
MI0012651
Description
Equus caballus eca-mir-1892 precursor miRNA
Gene family
MIPF0000799; mir-1892


Sequence

uggauauauuucuacucuugauuaaaguuuuguaagaaacaauacaggAUUUGGGGUGGGGGAUGGGGAgggaggauauu
........((((((((((((....((((((((((........))))))))))....)))))).))))))...........

Structure
---uggauaua      -      auua          aga 
           uuucua cucuug    aaguuuugua   a
           |||||| ||||||    ||||||||||    
           AGGGGU GGGGGU    UUUAggacau   a
uuauaggaggg      A      GGGG          aac 


Annotation confidence Not enough data
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Genome context
chr1: 171287043-171287122 [-]

Database links

Mature eca-miR-1892

Accession MIMAT0012895
Description Equus caballus eca-miR-1892 mature miRNA
Sequence 49 - AUUUGGGGUGGGGGAUGGGGA - 69
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131