Stem-loop sequence rno-mir-761

Accession

MI0012615 (change log)

Description

Rattus norvegicus miR-761 stem-loop

Gene family

MIPF0000709; mir-761

Literature search

3 open access papers mention rno-mir-761
(8 sentences)

Stem-loop

   u  c  -gu                      g  a  g 
5'  gg aa   ggaggagcagcagggugaaacu ac ca u
    || ||   |||||||||||||||||||||| || ||  
3'  cc uu   ccuccucgucguuucacuuuga ug gu u
   a  c  agu                      g  -  c 

Deep sequencing

5 reads, 0 reads per million, 5 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (Rnor_6.0; GCA_000001895.4): chr5: 128651867-128651942 [+]
• Overlapping transcripts:

  sense

  ENSRNOT00000010440 ; Nrd1-202; intron 2

  ENSRNOT00000010462 ; Nrd1-201; 3'UTR (exon 4)

Database links

• EntrezGene:Mir761
• miRBase Tracker:MI0012615

Mature sequence rno-miR-761

• Accession: MIMAT0012853
• Sequence: 15 - gcagcagggugaaacugacaca - 36
• Deep sequencing: 1 reads, 1 experiments
• Evidence: not experimental
• Predicted targets:
  • TargetScanVert:rno-miR-761
  • miRDB:rno-miR-761
  • microrna.org:rno-miR-761

References

1. PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).