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miRBase |
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Stem-loop sequence rno-mir-293 |
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Accession | MI0012609 (change log) | |||||||||||||||
Description | Rattus norvegicus miR-293 stem-loop | |||||||||||||||
Gene family | MIPF0000068; mir-290 | |||||||||||||||
Literature search |
4 open access papers mention rno-mir-293 | |||||||||||||||
Stem-loop |
--cu - g a g u 5' gugauacu caaacu ugug cacuuu uuuc u |||||||| |||||| |||| |||||| |||| 3' cauuguga guuuga acgc gugaag aagg u uagc c a c - u |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence rno-miR-293-5p |
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Accession | MIMAT0012847 |
Previous IDs | rno-miR-293 |
Sequence |
8 - acucaaacugugugacacuuu - 28 |
Deep sequencing | 2196 reads, 139 experiments |
Evidence | experimental; SOLiD [2] |
Predicted targets |
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Mature sequence rno-miR-293-3p |
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Accession | MIMAT0017365 |
Previous IDs | rno-miR-293* |
Sequence |
44 - agugccgcaaaguuugcagugu - 65 |
Deep sequencing | 17 reads, 14 experiments |
Evidence | experimental; SOLiD [2] |
Predicted targets |
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References |
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1 |
PMID:18215311
"miRNAminer: a tool for homologous microRNA gene search"
BMC Bioinformatics. 9:39(2008).
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2 |
PMID:20403161
"Small RNA expression and strain specificity in the rat"
BMC Genomics. 11:249(2010).
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