miRBase entry: ptr-mir-661

Stem-loop ptr-mir-661


Accession
MI0012576
Description
Pan troglodytes ptr-mir-661 precursor miRNA
Gene family
MIPF0000465; mir-661


Sequence

cccaggagaggcugugcuguggggcagacgcaggccugagcccugguuucgggcUGCCUGGGUCUCUGGCCCACGCGUgaccuugggguggcu
((((((.(..((...((.(((((.(((((.(((((...(((((.......)))))))))).)))..)).)))))))))..)))))))......

Structure
------      a ag  ugu  u     g  --   g     cug     ug 
      cccagg g  gc   gc guggg ca  gac caggc   agccc  g
      |||||| |  ||   || ||||| ||  ||| |||||   |||||  u
      ggguuc c  UG   CG CACCC GU  CUG GUCCG   Ucggg  u
ucggug      - ag  ---  -     G  CU   G     ---     cu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr8: 146719003-146719095 [-]

Database links

Mature ptr-miR-661

Accession MIMAT0012814
Description Pan troglodytes ptr-miR-661 mature miRNA
Sequence 55 - UGCCUGGGUCUCUGGCCCACGCGU - 78
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39