miRBase entry: ptr-mir-602

Stem-loop ptr-mir-602


Accession
MI0012570
Description
Pan troglodytes ptr-mir-602 precursor miRNA
Gene family
MIPF0000767; mir-602


Sequence

ccuucucacccccgccuGACACGGGCCACACCUGCGGCCugcuguguucacucaggccgagugcgucuccugccaggcaagggagagcagagccccccug
.((.(((.(((..(((((.((.(((.(.(((...(((((((..((....)).))))))).))).).))).)).)))))..))).))).))..........

Structure
---------c  u   a   cc     A  C   C A   CUG       cu  g 
          cu cuc ccc  gccuG CA GGG C CAC   CGGCCug  gu u
          || ||| |||  ||||| || ||| | |||   |||||||  ||  
          ga gag ggg  cggac gu cuc g gug   gccggac  ca u
guccccccga  c   a   aa     c  c   u c   --a       -u  c 


Annotation confidence Not enough data
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Genome context
chr9: 116307493-116307592 [+]

Database links

Mature ptr-miR-602

Accession MIMAT0012808
Description Pan troglodytes ptr-miR-602 mature miRNA
Sequence 18 - GACACGGGCCACACCUGCGGCC - 39
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39