miRBase entry: ptr-mir-299

Stem-loop ptr-mir-299


Accession
MI0012563
Description
Pan troglodytes ptr-mir-299 precursor miRNA
Gene family
MIPF0000186; mir-299

Literature search
2 open access papers mention ptr-mir-299
(37 sentences)

Sequence

aagaaaUGGUUUACCGUCCCACAUACAUuuugaauauguaugugggacgguaaaccgcuucuugguauc
(((((.((((((((((((((((((((((.......)))))))))))))))))))))).)))))......

Structure
------     a                      uu 
      aagaa UGGUUUACCGUCCCACAUACAU  u
      ||||| ||||||||||||||||||||||  g
      uucuu gccaaauggcaggguguaugua  a
cuaugg     c                      ua 


Annotation confidence Not enough data
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Genome context
chr14: 86272294-86272362 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from ptr-mir-299
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-299

Accession MIMAT0012801
Description Pan troglodytes ptr-miR-299 mature miRNA
Sequence 7 - UGGUUUACCGUCCCACAUACAU - 28
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39