miRBase entry: mdo-mir-150

Stem-loop mdo-mir-150


Accession
MI0012504
Description
Monodelphis domestica mdo-mir-150 precursor miRNA
Gene family
MIPF0000197; mir-150


Sequence

1611 reads, 34 reads per million, 5 experiments
UCUCCCAACCCUUGUACCAGAGUccaucagagacCCGGUACGGGCUGUGGGGGACGgggagucggggcu
..((((.((((((((.(((.((((((((........)))..))))).)))...)))))).)).))))..

Structure
UC    A  -      --A   G     --   aga 
  UCCC AC CCUUGU   CCA AGUcc  auc   g
  |||| || ||||||   ||| |||||  |||    
  gggg ug gggGCA   GGU UCGGG  UGG   a
uc    c  a      GGG   G     CA   CCc 


Annotation confidence Not enough data
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Genome context
chr4: 412972134-412972202 [+]

Database links

Mature mdo-miR-150-5p

Accession MIMAT0012748
Description Monodelphis domestica mdo-miR-150-5p mature miRNA
Sequence 1 - UCUCCCAACCCUUGUACCAGAGU - 23
Evidence experimental
Illumina [2]

Mature mdo-miR-150-3p

Accession MIMAT0026940
Description Monodelphis domestica mdo-miR-150-3p mature miRNA
Sequence 35 - CCGGUACGGGCUGUGGGGGACG - 56
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45